Harbaugh says Colt McCoy is the backup

By Art Spander

SAN FRANCISCO — The coach even smiled. That told you as much as his words. Jim Harbaugh knows what he has. And now we know he has a second-team quarterback. Just in case.

And in the NFL, you never can get too far away from “just in case.”

The 49ers are an excellent football team, a statement not formulated after watching San Francisco beat the Minnesota Vikings 34-14 Sunday night, but in no way negated, either.

Preseason football, in truth, is exhibition football. In international soccer, they call it a “friendly,” because the results don’t count. In the standings, that is.

They count in the way a coaching staff and management determines what it has.

The Niners, who made it to the Super Bowl last year, have plenty.

“I saw a lot of good things,” said Harbaugh, who handled the questions with the ease that, well, the Niner defense handled Minnesota. “I was pleased the way we worked.”

When Colin Kaepernick, getting his first significant playing time of the summer, was at quarterback, the Niner machine was efficient and effective. It was 2012 all over again, six straight completions at one point, and eventually 7 of 13 for a touchdown and 72 yards. Hardly a surprise.

Then on came Colt McCoy, and he was a surprise. A delightful one. A week that in the minds of many skeptics began with McCoy, the new kid in town, about to be traded ended with McCoy firmly set as No. 2. Or is that just a ploy to get rid of him? You never can be sure in the Byzantine world of the NFL, but it was hard to believe Harbaugh wasn’t telling the whole truth and nothing but.

The kicker in all this is that until Sunday night, when he was 11 of 15 for 109 yards, and directed a 91-yard touchdown drive — if also throwing an interception — McCoy had been, well, "a bust" may be too strong, so we will say "disappointing."

San Francisco picked up Seneca Wallace a few days ago, and with Scott Tolzien still around and B.J. Daniels seeming like the man of the future — the new Kaepernick, if you will — McCoy was a question mark. The Niners got McCoy before the April draft. He hadn’t shown much. If anything.

The problem, McCoy said as he stood in front his locker in the Niner locker room, was he hadn’t learned the system well enough to feel at ease. “I was staying up late,” he said. “It just took a while.”

McCoy said everything finally began to click a few days ago, and he and Harbaugh had conversations that reassured Colt he would not be sent packing up if something happened to Kaepernick but rather sent in move the team.

“I wasn’t ever scared or nervous,” said McCoy, a third-round pick by the Cleveland Browns in the 2010 draft. “I saw a lot of improvement this week. This was my best week with the 49ers. I’m glad everyone liked tonight, but give credit to the other guys on the offense.”

Reports are that McCoy restructured his contract, dropping the base salary to the minimum $630,000 — he had been owed $21.5 million. Both Harbaugh and McCoy refused to discuss money.

Candlestick was maybe only half full, the usual for preseason games, but the crowd was edgy. Two men wearing Niner jerseys ran onto the field, halting the game, and then after security hauled them away a third, in an Indianapolis Colts jersey, bounded out of the stands. Go figure.

Also go figure Lavelle Hawkins, a Niner rookie wide receiver and return man from Cal. He zoomed 105 yards for a touchdown with a kickoff in the second quarter, which was beautiful. However, he strutted the final 20 yards or so and then, in the ultimate showboat move, whipped off his helmet, drawing two penalties on the one play.

He wasn’t done, eventually picking up two more big penalties. Surely he didn’t learn this from former Cal coach Jeff Tedford. “He’s got to do a better job of not getting hijacked emotionally after doing something great,” Harbaugh said of Hawkins.

The job Kaepernick did was solid. “When you get out there,” said Kaepernick, who had played only briefly the first two games, “and you find your rhythm, that’s how you want to be playing.”

Someone wondered if Kaepernick, who started last year second team and then replaced Alex Smith, was paying close attention to the quarterbacks behind him, especially McCoy.

“I’m always watching the other guys,” said Kaepernick, “seeing what they’re doing, seeing what the defense is doing and how I can help them during the game.”

Colt McCoy didn’t need much help. Neither did Colin Kaepernick.